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Literature record

Spondylo-epiphyseal dysplasia in two sibs due to a homozygous splicing variant in COL2A1.

PMID 32896647 | DOI 10.1016/j.ejmg.2020.104059 · European journal of medical genetics · 2020

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Type 2 collagenopathies encompass a large group of chondrodysplasias ranging from the perinatally lethal achondrogenesis type 2 and hypochondrogenesis at the severe end of the spectrum to early-onset osteoarthritis with normal stature at the milder end of the spectrum. With the exception of a few reported cases, these dysplasias are predominantly caused by heterozygous variants in the COL2A1 gene and hence show an autosomal dominant inheritance pattern. Here we report on two siblings, originating from a consanguineous family, who presented with disproportionate short stature, ocular abnormalities, cleft palate and hearing impairment. The radiographic study showed signs of a spondyloepiphyseal dysplasia, compatible with a type 2 collagen disorder. Indeed, both siblings were homozygous for a c.3111+2T > Cp.(Glu1033Lysfs*5) splice site variant in the COL2A1 gene. cDNA analysis performed on skin fibroblasts from the affected sibs revealed the co-occurrence of the wild-type transcript and an aberrant splice product, the latter believed to be degraded by nonsense-mediated mRNA decay. The parents who were heterozygous for this variant were phenotypically normal. This paper confirms that type 2 collagenopathies can show an autosomal recessive inheritance.

Validated evidence

TypeEntitySource evidenceConfidenceExtractor
geneCOL2A1“Spondylo-epiphyseal dysplasia in two sibs due to a homozygous splicing variant in COL2A1.”0.98hgnc_dict_v1
phenotypecleft lip and palate“Here we report on two siblings, originating from a consanguineous family, who presented with disproportionate short stature, ocular abnormalities, cleft palate and hearing impairment.”0.93phenotype_alias_lexicon_v2
populationPopulation“Here we report on two siblings, originating from a consanguineous family, who presented with disproportionate short stature, ocular abnormalities, cleft palate and hearing impairment.”0.80saudi_context_rules_v1